PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016647393.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 229aa    MW: 26375.8 Da    PI: 5.0501
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016647393.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM105.95e-33391693128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkdkevl 93 
                     +G+rF+P+++++vv+yL +k+ g++l+++++ike+ +y+++P +Lp+   k+  + +e ++F+ +++ y++ gk ++r+tksgyW   g+++ev+
  XP_016647393.1  39 VGYRFDPSEDQIVVFYLFNKILGRELPINDIIKEISVYDHDPDELPNgdfKHGLDCNEAFYFAYTEQVYSSrGKITRRTTKSGYWDLDGEEEEVK 133
                     7*********************************************5444444467799********99963777888****************9 PP

             NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + ++ +vg  k++vf+kg+ap+g +td +mheyr+
  XP_016647393.1 134 YRnGDITVGFEKVMVFHKGTAPNGIETDFIMHEYRV 169
                     9856677***************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100535.33237198IPR003441NAC domain
SuperFamilySSF1019417.32E-3437198IPR003441NAC domain
PfamPF023652.4E-1639169IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MALPSPQSTS QVPETEKDFD LLKCSKIENG KKEAEIHLVG YRFDPSEDQI VVFYLFNKIL  60
GRELPINDII KEISVYDHDP DELPNGDFKH GLDCNEAFYF AYTEQVYSSR GKITRRTTKS  120
GYWDLDGEEE EVKYRNGDIT VGFEKVMVFH KGTAPNGIET DFIMHEYRVN PLIVPTHVLN  180
DSIRAKIERY VVCRIIHEGV SNFPRTNFHQ DGLLGLLKKQ NQIDMTEIA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-233319810168Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008221511.11e-172PREDICTED: NAC transcription factor 29-like isoform X1
RefseqXP_008221512.11e-172PREDICTED: NAC transcription factor 29-like isoform X1
RefseqXP_008221513.11e-172PREDICTED: NAC transcription factor 29-like isoform X1
TrEMBLM5XUD81e-134M5XUD8_PRUPE; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.13e-28NAC-like, activated by AP3/PI